miRBase entry: bta-mir-495

Stem-loop bta-mir-495


Accession
MI0009849
Description
Bos taurus bta-mir-495 precursor miRNA
Gene family
MIPF0000110; mir-329

Literature search
2 open access papers mention bta-mir-495
(3 sentences)

Sequence

887 reads, 21 reads per million, 58 experiments
uggugccuggaaagaaguugcccauguucuuuucgcugauaugugacgAAACAAACAUGGUGCACUUCUUuuccggcauca
(((((((.((((((((((.(((((((((..((((((........).)))))..))))))).)))))))))))).)))))))

Structure
       u          u  -       cu     - uga 
uggugcc ggaaagaagu gc ccauguu  uuucg c   u
||||||| |||||||||| || |||||||  ||||| |    
acuacgg cuuUUCUUCA CG GGUACAA  AAAgc g   a
       c          -  U       AC     a ugu 


Annotation confidence Not enough data
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Genome context
chr21: 67851608-67851688 [+]
Clustered miRNAs
22 other miRNAs are < 10 kb from bta-mir-495
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-495

Accession MIMAT0009335
Description Bos taurus bta-miR-495 mature miRNA
Sequence 49 - AAACAAACAUGGUGCACUUCUU - 70
Evidence experimental
cloned [3]

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39

  2. PubMed ID: 19758457
    Characterization of bovine miRNAs by sequencing and bioinformatics analysis
    Jin W, Grant JR, Stothard P, Moore SS, Guan LL
    BMC Mol Biol (2009) 10:90

  3. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125