Stem-loop bta-mir-592

Accession

MI0009875

Description

Bos taurus bta-mir-592 precursor miRNA

Gene family

MIPF0000340; mir-592

Literature search

2 open access papers mention bta-mir-592
(5 sentences)

Sequence

76 reads, 4 reads per million, 43 experiments

uauuaugccaugacAUUGUGUCAAUAUGCGAUGAUGUgugugauggcacagcgucaucacguggugacgcaacaucaugacguaagacgucacaac
..(((((.(((((..((((((((.((((.((((((((((((....))))).))))))).)))).))))))))..))))).)))))...........

Structure

---------ua     c     cA        A    C       -     g 
           uuaug cauga  UUGUGUCA UAUG GAUGAUG Ugugu a
           ||||| |||||  |||||||| |||| ||||||| |||||  
           aaugc guacu  aacgcagu gugc cuacugc acacg u
caacacugcag     a     ac        g    a       g     g 

Annotation confidence Not enough data

Genome context

chr4: 92442143-92442238 [-]

Mature bta-miR-592

• Accession: MIMAT0009353
• Description: Bos taurus bta-miR-592 mature miRNA
• Sequence: 15 - AUUGUGUCAAUAUGCGAUGAUGU - 37
• Evidence: experimental ; cloned [3]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


3. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125