miRBase entry: bta-mir-92b

Stem-loop bta-mir-92b


Accession
MI0009906
Description
Bos taurus bta-mir-92b precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
19 open access papers mention bta-mir-92b
(41 sentences)

Sequence

28328 reads, 396 reads per million, 68 experiments
cgggccccgggcgggcgggagggacgggacgcggugcaguguuguucuuuccccugccaaUAUUGCACUCGUCCCGGCCUCCggcccccucggccc
.(((((..(((.((((.(((((..(((((((.((((((((((((..(........).))))))))))))))))))).))))).))))))).)))))

Structure
c     cc   c    g     ga       c            uu uuu 
 gggcc  ggg gggc ggagg  cgggacg ggugcaguguug  c   c
 |||||  ||| |||| |||||  ||||||| ||||||||||||  |    
 cccgg  ucc cccg CCUCC  GCCCUGC UCACGUUAUaac  g   c
-     -c   -    g     -G       -            -c ucc 


Annotation confidence Not enough data
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Genome context
chr3: 15638041-15638136 [-]

Database links

Mature bta-miR-92b

Accession MIMAT0009384
Description Bos taurus bta-miR-92b mature miRNA
Sequence 61 - UAUUGCACUCGUCCCGGCCUCC - 82
Evidence experimental
cloned [2]

References

  1. PubMed ID: 19758457
    Characterization of bovine miRNAs by sequencing and bioinformatics analysis
    Jin W, Grant JR, Stothard P, Moore SS, Guan LL
    BMC Mol Biol (2009) 10:90

  2. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125