miRBase entry: mmu-mir-1948

Stem-loop mmu-mir-1948


Accession
MI0009939
Symbol
MGI: Mir1948
Description
Mus musculus mmu-mir-1948 precursor miRNA

Literature search
1 open access papers mention mmu-mir-1948
(1 sentences)

Sequence

4210 reads, 35 reads per million, 67 experiments
auucucaccuuacuAUAUGAGUAUUCUGCCUAAAUgugguguacggauacaUUUAGGCAGAGCACUCGUACAGuaaggugagaau
((((((((((((((.(((((((.(((((((((((((((.........))))))))))))))).))))))).))))))))))))))

Structure
              A       A               gug 
auucucaccuuacu UAUGAGU UUCUGCCUAAAUgug   u
|||||||||||||| ||||||| |||||||||||||||   a
uaagaguggaauGA AUGCUCA GAGACGGAUUUacau   c
              C       C               agg 


Annotation confidence High
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Genome context
chr18: 12714811-12714895 [+]

Database links

Mature mmu-miR-1948-5p

Accession MIMAT0017344
Description Mus musculus mmu-miR-1948-5p mature miRNA
Sequence 15 - AUAUGAGUAUUCUGCCUAAAU - 35
Evidence experimental
454 [2]
Database links
Predicted targets

Mature mmu-miR-1948-3p

Accession MIMAT0009415
Description Mus musculus mmu-miR-1948-3p mature miRNA
Sequence 52 - UUUAGGCAGAGCACUCGUACAG - 73
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20668074
    Identification and analysis of expression of novel microRNAs of murine gammaherpesvirus 68
    "Zhu JY, Strehle M, Frohn A, Kremmer E, Hofig KP, Meister G, Adler H"
    "J Virol (2010) 84:10266-10275

  2. PubMed ID: 18849523
    In-depth characterization of the microRNA transcriptome in a leukemia progression model
    "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
    "Genome Res (2008) 18:1787-1797