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miRBase |
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Stem-loop sequence sme-mir-1175 |
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Accession | MI0010789 (change log) | ||||
Description | Schmidtea mediterranea miR-1175 stem-loop | ||||
Literature search |
1 open access papers mention sme-mir-1175 | ||||
Stem-loop |
--uauu aug - au a - aa 5' aaaauucuaaa agu ggag guugaa uucaaaa aaau u ||||||||||| ||| |||| |||||| ||||||| |||| 3' uuuuaggguuu uca ccuc caacuu gaguuuu uuug u ucaaac -aa u cu a a cu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sme-miR-1175-5p |
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Accession | MIMAT0012147 |
Previous IDs | sme-miR-1175 |
Sequence |
18 - gaguggagauguugaaauucaaa - 40 |
Evidence | experimental; 454 [1], Illumina [1-2] |
Mature sequence sme-miR-1175-3p |
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Accession | MIMAT0011249 |
Previous IDs | sme-miR-1175* |
Sequence |
60 - ugagauucaacuccuccuacu - 80 |
Evidence | experimental; 454 [1], Illumina [1-2] |
References |
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1 |
PMID:19564616
"High-resolution profiling and discovery of planarian small RNAs"
Proc Natl Acad Sci U S A. 106:11546-11551(2009).
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2 |
PMID:19553344
"Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea"
RNA. 15:1483-1491(2009).
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