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miRBase |
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Stem-loop sequence sme-mir-2160-1 |
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Accession | MI0010794 (change log) | ||||
Description | Schmidtea mediterranea miR-2160-1 stem-loop | ||||
Gene family | MIPF0000769; mir-2160 | ||||
Literature search |
1 open access papers mention sme-mir-2160-1 | ||||
Stem-loop |
-aaaauc -uaaauau g u guacua 5' uuugugau ggc cuuaugug agaaccgguu u |||||||| ||| |||||||| |||||||||| 3' aaacacua ccg gaauguac uuuuggucaa a cuacuaa ugauaaac a u auuuuu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sme-miR-2160-5p |
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Accession | MIMAT0011254 |
Previous IDs | sme-miR-2160 |
Sequence |
21 - uggcgcuuauguguagaaccgg - 42 |
Evidence | experimental; Illumina [1-2], 454 [2] |
Mature sequence sme-miR-2160-1-3p |
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Accession | MIMAT0011416 |
Previous IDs | sme-miR-2160-1* |
Sequence |
65 - uuuuucauguaagagcccaaa - 85 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:19564616
"High-resolution profiling and discovery of planarian small RNAs"
Proc Natl Acad Sci U S A. 106:11546-11551(2009).
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2 |
PMID:19553344
"Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea"
RNA. 15:1483-1491(2009).
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