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miRBase |
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Stem-loop sequence sme-mir-2160-2 |
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Accession | MI0010948 (change log) | ||||
Description | Schmidtea mediterranea miR-2160-2 stem-loop | ||||
Gene family | MIPF0000769; mir-2160 | ||||
Literature search |
1 open access papers mention sme-mir-2160-2 | ||||
Stem-loop |
c uaa a - g u guacua 5' uuugugau au ugg c cuuaugug agaaccgguu u |||||||| || ||| | |||||||| |||||||||| 3' aaacacua ua acc g gaauguac uuuuggucaa a a uga a u a u auuuuu |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sme-miR-2160-5p |
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Accession | MIMAT0011254 |
Previous IDs | sme-miR-2160 |
Sequence |
16 - uggcgcuuauguguagaaccgg - 37 |
Evidence | experimental; Illumina [1-2], 454 [2] |
Mature sequence sme-miR-2160-2-3p |
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Accession | MIMAT0013776 |
Previous IDs | sme-miR-2160-2* |
Sequence |
58 - gguuuuucauguaagagucc - 77 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:19553344
"Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea"
RNA. 15:1483-1491(2009).
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2 |
PMID:19564616
"High-resolution profiling and discovery of planarian small RNAs"
Proc Natl Acad Sci U S A. 106:11546-11551(2009).
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