miRBase entry: dps-mir-2522a

Stem-loop dps-mir-2522a


Accession
MI0011655
Description
Drosophila pseudoobscura dps-mir-2522a precursor miRNA


Sequence

gcuccauuuuguacgauugaaguacuagcggagaaugcguuguuauuggugucuguggaaauccaAAAGCAGCGAUGUUCUUCGGCAGuaccacaaucaauauuuagugagu
((((.(((..(((.(((((..(((((..((((((((((((((((.((((.............)))).))))))).)))))))))..)))))..)))))..)))..)))))))

Structure
    c   uu   -c     aa     ag         -       a    ugucu 
gcuc auu  gua  gauug  guacu  cggagaaug cguuguu uugg     g
|||| |||  |||  |||||  |||||  ||||||||| ||||||| ||||     u
ugag uga  uau  cuaac  cauGA  GCUUCUUGU GCGACGA Aacc     g
    -   uu   aa     ac     CG         A       A    uaaag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
XL_group1e: 8365900-8366011 [-]
Clustered miRNAs
12 other miRNAs are < 10 kb from dps-mir-2522a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dps-miR-2522a

Accession MIMAT0012310
Description Drosophila pseudoobscura dps-miR-2522a mature miRNA
Sequence 66 - AAAGCAGCGAUGUUCUUCGGCAG - 88
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20037610
    Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
    "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
    "Nat Genet (2010) 42:6-9