miRBase entry: dps-mir-2524

Stem-loop dps-mir-2524

Accession

MI0011657

Description

Drosophila pseudoobscura dps-mir-2524 precursor miRNA

Sequence

gaguuauauaguuuguaguuggcccgguucccagcacauguauguugaauuaaauaucaUAUUGUACUGCGACUCGGGCCAauuauuagcuca
((((((........(((((((((((((.((.(((.(((((((((((......))))).))).))).))).)).))))))))))))))))))).

Structure

-      uauaguuu             u  c   c   -   -     ga 
 gaguua        guaguuggcccgg uc cag aca ugu auguu  a
 ||||||        ||||||||||||| || ||| ||| ||| |||||   
 cucgau        uauuaACCGGGCU AG GUC UGU AUa uauaa  u
a      --------             C  C   A   U   c     au

Annotation confidence Not enough data

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Genome context

XL_group1e: 8376659-8376751 [-]

Clustered miRNAs

13 other miRNAs are < 10 kb from dps-mir-2524

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dps-miR-2524

Accession	MIMAT0012312
Description	Drosophila pseudoobscura dps-miR-2524 mature miRNA
Sequence	60 - UAUUGUACUGCGACUCGGGCCA - 81
Evidence	experimental Illumina [1]

References

PubMed ID: 20037610
Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
"Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
"Nat Genet (2010) 42:6-9