Stem-loop dps-mir-2567c

Accession

MI0011713

Description

Drosophila pseudoobscura dps-mir-2567c precursor miRNA

Gene family

MIPF0000934; mir-2567

Sequence

guaaccaaauuucaaguuucuuACCAGUGUGGAUUUGUAAAACGUugcguuuuuaaacucgUAUUGCAUUUCCAAUCUGGCAAguuagcuugaacaucaccugcg
(((.......((((((((.(((.((((..((((..(((((.(((...............))).)))))..))))..)))).)))..)))))))).......))).

Structure

-   accaaau        -u   A    UG    UU     A   Uugcgu 
 gua       uucaaguu  cuu CCAG  UGGA  UGUAA ACG      u
 |||       ||||||||  ||| ||||  ||||  ||||| |||      u
 cgu       aaguucga  gAA GGUC  ACCU  ACGUU Ugc      u
g   ccacuac        uu   C    UA    UU     A   ucaaau 

Annotation confidence Not enough data

Genome context

4_group4: 3553417-3553521 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from dps-mir-2567c

Mature dps-miR-2567c-5p

• Accession: MIMAT0012398
• Description: Drosophila pseudoobscura dps-miR-2567c-5p mature miRNA
• Sequence: 23 - ACCAGUGUGGAUUUGUAAAACGU - 45
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2567c-3p

• Accession: MIMAT0012399
• Description: Drosophila pseudoobscura dps-miR-2567c-3p mature miRNA
• Sequence: 62 - UAUUGCAUUUCCAAUCUGGCAA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9