Stem-loop dsi-mir-978a

Accession

MI0011730

Description

Drosophila simulans dsi-mir-978a precursor miRNA

Gene family

MIPF0000926; mir-978

Sequence

gcggcacaaucugcAAUCUACGCCACUGGCUUACGUuguggucgagaaucgUGUCCAGUGCCGUAUAUUGCAGuuguguggacgca
(((((((((.(((((((.((((.((((((..((((((.(.....).)).)))).)))))).)))).)))))))))))))...))).

Structure

-   ---      u       C    C      CU    -  g g 
 gcg   gcacaa cugcAAU UACG CACUGG  UACG Uu u g
 |||   |||||| ||||||| |||| ||||||  |||| || | u
 cgc   uguguu GACGUUA AUGC GUGACC  GUgc aa a c
a   agg      -       U    C      -U    u  g g 

Annotation confidence Not enough data

Genome context

Unknown

Mature dsi-miR-978a-3p

• Accession: MIMAT0012424
• Description: Drosophila simulans dsi-miR-978a-3p mature miRNA
• Sequence: 52 - UGUCCAGUGCCGUAUAUUGCAG - 73
• Evidence: experimental ; Illumina [1-2]

Mature dsi-miR-978a-5p

• Accession: MIMAT0037355
• Description: Drosophila simulans dsi-miR-978a-5p mature miRNA
• Sequence: 15 - AAUCUACGCCACUGGCUUACGU - 36
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250