Stem-loop dsi-mir-978b

Accession

MI0011774

Description

Drosophila simulans dsi-mir-978b precursor miRNA

Sequence

gcguccacacaacugcaaUAUACGGCACUGGACACGAUUCUCGACcacaacgUAAGCCAGUGGCGUAGAUUGCAgauugugccgcc
(((....((((((((((((.((((.((((((..(((..............)))...)))))).)))).))))))).))))).))).

Structure

-   ucca     -       A    G      -AC   AUUCUC 
 gcg    cacaa cugcaaU UACG CACUGG   ACG      G
 |||    ||||| ||||||| |||| ||||||   |||       
 cgc    guguu gACGUUA AUGC GUGACC   Ugc      A
c   ---c     a       G    G      GAA   aacacC 

Annotation confidence Not enough data

Genome context

Unknown

Mature dsi-miR-978b-3p

• Accession: MIMAT0012503
• Description: Drosophila simulans dsi-miR-978b-3p mature miRNA
• Sequence: 53 - UAAGCCAGUGGCGUAGAUUGCA - 74
• Evidence: experimental ; Illumina [1-2]

Mature dsi-miR-978b-5p

• Accession: MIMAT0037358
• Description: Drosophila simulans dsi-miR-978b-5p mature miRNA
• Sequence: 19 - UAUACGGCACUGGACACGAUUCUCGAC - 45
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250