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miRBase |
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Stem-loop sequence aae-mir-932 |
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Accession | MI0013475 (change log) | ||||
Description | Aedes aegypti miR-932 stem-loop | ||||
Gene family | MIPF0000588; mir-932 | ||||
Literature search |
2 open access papers mention aae-mir-932 | ||||
Stem-loop |
-gua -- a a g a g - u 5' aucau agaau gcuuca uuccgua ugc uugcagu ug c u ||||| ||||| |||||| ||||||| ||| ||||||| || | 3' uagua ucuua cgaagu aaggugu acg aacguca gc g u cuac ac g g a - a a a |
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Deep sequencing |
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Confidence |
Annotation confidence: high
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Comments |
This miRNA was identified independently in Aedes aegypti [1] and in the closely related Aedes albopictus, for which there was no genome sequence [2]. The latter reads were therefore also mapped to the Aedes aegypti genome [2]. |
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Genome context |
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Database links |
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Mature sequence aae-miR-932-5p |
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Accession | MIMAT0014269 |
Previous IDs | aae-miR-932* |
Sequence |
18 - ucaauuccguagugcauugcag - 39 |
Deep sequencing | 43753 reads, 2 experiments |
Evidence | experimental; Illumina [2] |
Mature sequence aae-miR-932-3p |
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Accession | MIMAT0014270 |
Previous IDs | aae-miR-932 |
Sequence |
56 - ugcaagcaauguggaagugaag - 77 |
Deep sequencing | 54128 reads, 2 experiments |
Evidence | experimental; 454 [1], Illumina [2] |
References |
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1 | |
2 |
PMID:20167119
"Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus"
BMC Genomics. 11:119(2010).
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