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miRBase |
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Stem-loop sequence aae-mir-2941-2 |
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Accession | MI0013492 (change log) | |||||||
Description | Aedes aegypti miR-2941-2 stem-loop | |||||||
Gene family | MIPF0000842; mir-2941 | |||||||
Literature search |
2 open access papers mention aae-mir-2941-2 | |||||||
Stem-loop |
caa gc a c - c c aua g 5' gaaug gauuguucgug ag uc agcug auuaca g ug a ||||| ||||||||||| || || ||||| |||||| | || a 3' uuuac uuaacaggcac uc ag ucggc ugaugu u gc u aug -a c a a a u --g a |
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Deep sequencing |
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Confidence |
Annotation confidence: not enough data
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Comments |
This miRNA was identified independently in Aedes aegypti [1] and in the closely related Aedes albopictus, for which there was no genome sequence [2]. The latter reads were therefore also mapped to the Aedes aegypti genome [2]. |
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence aae-miR-2941 |
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Accession | MIMAT0014286 |
Sequence |
59 - uaguacggcuagaacuccacgg - 80 |
Deep sequencing | 54 reads, 2 experiments |
Evidence | experimental; 454 [1], Illumina [2] |
References |
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1 | |
2 |
PMID:20167119
"Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus"
BMC Genomics. 11:119(2010).
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