miRBase entry: cqu-mir-92

Stem-loop cqu-mir-92


Accession
MI0013594
Description
Culex quinquefasciatus cqu-mir-92 precursor miRNA
Gene family
MIPF0000013; mir-25

Literature search
1 open access papers mention cqu-mir-92
(14 sentences)

Sequence

aucaaucuacgcaucgguacggacaggggcaacauuuugacauuugaagcuaauAUUGCACUUGUCCCGGCCUaugcguggaguuggc
.(((((((((((((.(((..(((((((.((((.(((...............))).)))).)))))))..))).))))))))).)))).

Structure
a    -         c   ac       g    c   uugaca 
 ucaa ucuacgcau ggu  ggacagg gcaa auu      u
 |||| ||||||||| |||  ||||||| |||| |||      u
 gguu aggugcgua CCG  CCUGUUC CGUU uaa      u
c    g         U   GC       A    A   ucgaag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
supercont3.722: 174899-174986 [-]

Database links

Mature cqu-miR-92

Accession MIMAT0014399
Description Culex quinquefasciatus cqu-miR-92 mature miRNA
Sequence 55 - AUUGCACUUGUCCCGGCCU - 73
Evidence

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119