miRBase entry: hsa-mir-548x

Stem-loop hsa-mir-548x


Accession
MI0014244
Symbol
HGNC: MIR548X
Description
Homo sapiens hsa-mir-548x precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
43 open access papers mention hsa-mir-548x
(144 sentences)

Sequence

2019 reads, 59 reads per million, 65 experiments
agguuagUGCAAAAGUAAUUGCAGUUUUUGcguuacuuucaaucgUAAAAACUGCAAUUACUUUCacaccaaucu
(((((.(((..(((((((((((((((((((((...........)))))))))))))))))))))..))).)))))

Structure
     a   CA                     uuac 
agguu gUG  AAAGUAAUUGCAGUUUUUGcg    u
||||| |||  |||||||||||||||||||||    u
ucuaa cac  UUUCAUUAACGUCAAAAAUgc    u
     c   aC                     uaac 


Annotation confidence High
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Genome context
chr21: 18686090-18686164 [-]

Disease association
hsa-mir-548x is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-548x-3p

Accession MIMAT0015081
Description Homo sapiens hsa-miR-548x-3p mature miRNA
Sequence 46 - UAAAAACUGCAAUUACUUUC - 65
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature hsa-miR-548x-5p

Accession MIMAT0022733
Description Homo sapiens hsa-miR-548x-5p mature miRNA
Sequence 8 - UGCAAAAGUAAUUGCAGUUUUUG - 30
Evidence not_experimental
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685