Accession
MI0014513
Description
Arabidopsis lyrata
aly-MIR157d precursor miRNA
Gene family
MIPF0000008;
MIR156
Sequence
7
reads,
244
reads per million, 1 experiments
auguuguauguauaguggagggugauagugugguugcUGACAGAAGAUAGAGAGCACuaaggaugauaugcaaaacacacacauauaugugcuucuaauuguauuucauacuuaacaucaauguugaugugaaucgugaaaaaaaaaaaagagagaagagcuagaggagcaucugcaucucuauuccuauguGCUCUCUAUGCUUCUGUCAUCaccuuuuuuucucuauuucucucuacacauuacauauucacau
((((.(((((((..((((((((.(((((...(((.(.((((((((((((((((((((..((((....((((((......((((....)))).......))))))(((((.....((((((....)))))).....))))).........(((((..((((((.....))).)))...)))))..))))..))))))))))).))))))))).)))).........))))).))))))))....)))))))..))))
((((.(((((((..((((((((.(((((...(((.(.((((((((((((((((((((..((((....((((((......((((....)))).......))))))(((((.....((((((....)))))).....))))).........(((((..((((((.....))).)))...)))))..))))..))))))))))).))))))))).)))).........))))).))))))))....)))))))..))))
Structure
-u --ua u ------ugu u c - ua ---ugauaugcaaaacacacacauauaugugcuucuaauuguau acuua a
augu guaugua guggaggg gauag ggu g UGACAGAAG AUAGAGAGCAC agga uucau acauca u
|||| ||||||| |||||||| ||||| ||| | ||||||||| ||||||||||| |||| ||||| ||||||
uaca uauacau caucucuc uuauc cca C ACUGUCUUC UAUCUCUCGug uccu aagug uguagu g
cu uaca u ucuuuuuuu - U G ua uaucucuacgucuacgaggagaucgagaagagagaaaaaaaaaa cuaag u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348713.1: 24813775-24814030 [-]
Database links
Mature aly-miR157d-5p
| Accession | MIMAT0017419 |
| Description | Arabidopsis lyrata aly-miR157d-5p mature miRNA |
| Sequence | 38 - UGACAGAAGAUAGAGAGCAC - 57 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR157d-3p
| Accession | MIMAT0017420 |
| Description | Arabidopsis lyrata aly-miR157d-3p mature miRNA |
| Sequence | 193 - GCUCUCUAUGCUUCUGUCAUC - 213 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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