Accession
MI0014519
Description
Arabidopsis lyrata
aly-MIR319b precursor miRNA
Gene family
MIPF0000010;
MIR159
Sequence
11
reads,
384
reads per million, 1 experiments
aaauguuaauaugguuauagauguugaguuggugaaggaagAGAGCUUUCUUCGGUCCACUCauggaguaauaugugagauuuaauugacucucgacucauucauccaaauaccaaaugaaagaacauguucucauaugguaaaugaaugaaugaugcgagagacaaauugagucuucacuucucuaugcUUGGACUGAAGGGAGCUCCCUauuuuuauuuuuucucggucguacacauuucauuu
(((((.....(((..(((.(((..((((..((((((((.((.(((((((((((((((((..(((((((......(((((((((((((..((((((..((((((((.((..(((((.((((..(((....))))))).)))))..)).))))))))..))))))...))))))))).))))..)))))))..))))))))))))))))).)).))))))))....))))))))))..)))..)))))
(((((.....(((..(((.(((..((((..((((((((.((.(((((((((((((((((..(((((((......(((((((((((((..((((((..((((((((.((..(((((.((((..(((....))))))).)))))..)).))))))))..))))))...))))))))).))))..)))))))..))))))))))))))))).)).))))))))....))))))))))..)))..)))))
Structure
uuaau gu a gu --uu a A CU uaauau - -ga ac c aa a aa c
aaaug aug uau gau ugag ggugaagg ag GAGCUUUCUUCGGUCCA Cauggag guga gauuuaauu cucucg ucauucau ca uacca auga gaa a
||||| ||| ||| ||| |||| |||||||| || ||||||||||||||||| ||||||| |||| ||||||||| |||||| |||||||| || ||||| |||| |||
uuuac uac aug cug gcuc uuauuuuu UC CUCGAGGGAAGUCAGGU guaucuc cacu cugaguuaa gagagc aguaagua gu auggu uacu cuu u
---uu ac - -- uuuu a C Uc ----uu u aca gu a aa a -- g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348719.1: 21388787-21389032 [+]
Database links
Mature aly-miR319b-5p
| Accession | MIMAT0017431 |
| Description | Arabidopsis lyrata aly-miR319b-5p mature miRNA |
| Sequence | 42 - AGAGCUUUCUUCGGUCCACUC - 62 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR319b-3p
| Accession | MIMAT0017432 |
| Description | Arabidopsis lyrata aly-miR319b-3p mature miRNA |
| Sequence | 191 - UUGGACUGAAGGGAGCUCCCU - 211 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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