Accession
MI0014536
Description
Arabidopsis lyrata
aly-MIR166e precursor miRNA
Gene family
MIPF0000004;
MIR166
Sequence
112
reads,
3905
reads per million, 1 experiments
gaguccauguucuucagugaagcuuuuucuuuugaggGGAAUGUUGUCUGGCACGAGGcccuuaacuuagaucuauauuugauuuuaugucucuucuuuauuuauuagucuauauauacaugaaugaucgauuuuaacgguuaaugacgUCGGACCAGGCUUCAUUCCCCucaauuauaucgcuucuucgaucuuggcuu
(((.(((.(.((......(((((........((((((((((((..((((((..(((.(.(.((((((...........((((((((((((...........................))))))..)))))).......)))))).).).)))..))))))..)))))))))))).......)))))...)).).))))))
(((.(((.(.((......(((((........((((((((((((..((((((..(((.(.(.((((((...........((((((((((((...........................))))))..)))))).......)))))).).).)))..))))))..)))))))))))).......)))))...)).).))))))
Structure
u u u uucagu uuuuucuu UU CA G c c uagaucuauau -- cucuucuuuauu gag cca g uc gaagc uugaggGGAAUG GUCUGG CGA G c uuaacu uugauu uuaugu u ||| ||| | || ||||| |||||||||||| |||||| ||| | | |||||| |||||| |||||| a uuc ggu c ag cuucg aacuCCCCUUAC CGGACC GCU c g aauugg agcuag aguaca u - u u ---cuu -cuauauu UU AG g a u ----caauuuu ua uauauaucugau
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348719.1: 21195577-21195776 [+]
Database links
Mature aly-miR166e-5p
| Accession | MIMAT0017467 |
| Description | Arabidopsis lyrata aly-miR166e-5p mature miRNA |
| Sequence | 38 - GGAAUGUUGUCUGGCACGAGG - 58 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR166e-3p
| Accession | MIMAT0017468 |
| Description | Arabidopsis lyrata aly-miR166e-3p mature miRNA |
| Sequence | 150 - UCGGACCAGGCUUCAUUCCCC - 170 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
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References
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