Accession
MI0014539
Description
Arabidopsis lyrata
aly-MIR167a precursor miRNA
Gene family
MIPF0000023;
MIR167_1
Sequence
2902
reads,
101185
reads per million, 1 experiments
ggugcaccggcaucugaUGAAGCUGCCAGCAUGAUCUAauuagcuuucuuuauaucuguuguuguguuucauaacgaugguuaagagaugagucucgauuaGAUCAUGUUCGCAGUUUCACCcguugacugucgcacc
(((((..(((((.(.(.(((((((((.((((((((((((((((((((((((.((.(((((((((((...))))))))))).))))))).))).)).)))))))))))))).))))))))).).).)).)))..)))))
(((((..(((((.(.(.(((((((((.((((((((((((((((((((((((.((.(((((((((((...))))))))))).))))))).))).)).)))))))))))))).))))))))).).).)).)))..)))))
Structure
ac - u u a C - - - a u u
ggugc cgg ca c g UGAAGCUGC AGCAUGAUCUAauu ag cuu ucuuu ua cuguuguugug
||||| ||| || | | ||||||||| |||||||||||||| || ||| ||||| || ||||||||||| u
ccacg guc gu g C ACUUUGACG UUGUACUAGauuag uc gag agaga au gguagcaauac
cu a u c C C c u u - u u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348715.1: 10278871-10279008 [+]
Database links
Mature aly-miR167a-5p
| Accession | MIMAT0017473 |
| Description | Arabidopsis lyrata aly-miR167a-5p mature miRNA |
| Sequence | 18 - UGAAGCUGCCAGCAUGAUCUA - 38 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR167a-3p
| Accession | MIMAT0017474 |
| Description | Arabidopsis lyrata aly-miR167a-3p mature miRNA |
| Sequence | 102 - GAUCAUGUUCGCAGUUUCACC - 122 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
References
|
