Accession
MI0014570
Description
Arabidopsis lyrata
aly-MIR390b precursor miRNA
Gene family
MIPF0000101;
MIR390
Sequence
8
reads,
279
reads per million, 1 experiments
aguagaaaaauagcuauaAAGCUCAGGAGGGAUAGCGCCaugaaucaccaauacuguagguuuuguauauacaugcauguagaucuguuggCGCUAUCCAUCCUGAGUUCCAuagcuucuucuugcu
(((((((....((((((..(((((((((.(((((((((((...(((.....(((((((.((.........)).)))).))))))....))))))))))).)))))))))..))))))..))).))))
(((((((....((((((..(((((((((.(((((((((((...(((.....(((((((.((.........)).)))).))))))....))))))))))).)))))))))..))))))..))).))))
Structure
- aaau aA G -uga accaa - g uuu
agua gaa agcuau AGCUCAGGA GGAUAGCGCCa auc uac ugua gu g
|||| ||| |||||| ||||||||| ||||||||||| ||| ||| |||| || u
ucgu cuu ucgauA UUGAGUCCU CCUAUCGCggu uag aug acgu ca a
u --cu CC A uguc ----- u a uau
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348720.1: 18617960-18618086 [+]
Database links
Mature aly-miR390b-5p
| Accession | MIMAT0017535 |
| Description | Arabidopsis lyrata aly-miR390b-5p mature miRNA |
| Sequence | 19 - AAGCUCAGGAGGGAUAGCGCC - 39 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR390b-3p
| Accession | MIMAT0017536 |
| Description | Arabidopsis lyrata aly-miR390b-3p mature miRNA |
| Sequence | 92 - CGCUAUCCAUCCUGAGUUCCA - 112 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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