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miRBase |
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Stem-loop sequence aly-MIR395f |
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Accession | MI0014580 (change log) | |||||||||||
Description | Arabidopsis lyrata miR395f stem-loop | |||||||||||
Gene family | MIPF0000016; MIR395 | |||||||||||
Stem-loop |
a u u u -a cu - ucuaa a 5' guca auguc ccu gaguucccuuaaacgcuuua uguuc ca uug uug gauc a |||| ||||| ||| |||||||||||||||||||| ||||| || ||| ||| |||| 3' cggu uacag gga cucagggggguuugugaagu acaag gu aac aac cuag u a u u c ca cu u -uuag c |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Clustered miRNAs |
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Database links |
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Mature sequence aly-miR395f-5p |
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Accession | MIMAT0017555 |
Previous IDs | aly-miR395f* |
Sequence |
18 - guucccuuaaacgcuuuauug - 38 |
Evidence | experimental; Illumina [1], SOLiD [2] |
Mature sequence aly-miR395f-3p |
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Accession | MIMAT0017556 |
Previous IDs | aly-miR395f |
Sequence |
92 - cugaaguguuuggggggacuc - 112 |
Evidence | experimental; Illumina [1], SOLiD [2] |
References |
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1 |
PMID:20407027
"MicroRNA gene evolution in Arabidopsis lyrata and Arabidopsis thaliana"
Plant Cell. 22:1074-1089(2010).
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2 |
PMID:20407023
"Arabidopsis lyrata small RNAs: transient MIRNA and small interfering RNA loci within the Arabidopsis genus"
Plant Cell. 22:1090-1103(2010).
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