Accession
MI0014641
Description
Arabidopsis lyrata
aly-MIR402 precursor miRNA
Sequence
4
reads,
139
reads per million, 1 experiments
gaguugcauaguggcagucuucuuuuguuuuuauuucaccaugauccUUGGCCUAUUGAACCUCUGUUUuaacugcuuuugaaaaguuuuccuuuuuagaaaucuucuugucucuuucuccaacaacaucccguuaguucuuggaagaaauuaagacugacuuccaaaaacccuuuuaaaACAGAGUUCCGUAGACCACGGauugcaaaagagacuaugccacugaaaacuu
(((((...((((((((((((.(((((((..............(((((.(((.((((.((((.((((((((((....((((((((((.....))))))))))........((((.(((((((((.(((.........))).)))).)))))...))))..................)))))))))))))).)))).))).))))))))))))))))..))))))))..)))))
(((((...((((((((((((.(((((((..............(((((.(((.((((.((((.((((((((((....((((((((((.....))))))))))........((((.(((((((((.(((.........))).)))).)))))...))))..................)))))))))))))).)))).))).))))))))))))))))..))))))))..)))))
Structure
gca -- u uuuuauuucaccau U C U C cugcuuuugaaaaguuuuccuuuuuagaaaucuucuu --c - c auc
gaguu uaguggca gucu cuuuugu gaucc UGG CUAU GAAC UCUGUUUuaa gucu uuucu ccaa aac c
||||| |||||||| |||| ||||||| ||||| ||| |||| |||| |||||||||| |||| ||||| |||| ||| c
uucaa gucaccgu caga gaaaacg uuaGG ACC GAUG CUUG AGACAaaauu caga aaaga gguu uug g
-aa au - -------------- C A C - -------------------uucccaaaaaccuucagu auu a c auu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL348714.1: 17541836-17542067 [+]
Database links
Mature aly-miR402-5p
| Accession | MIMAT0017681 |
| Description | Arabidopsis lyrata aly-miR402-5p mature miRNA |
| Sequence | 48 - UUGGCCUAUUGAACCUCUGUUU - 69 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
Mature aly-miR402-3p
| Accession | MIMAT0017682 |
| Description | Arabidopsis lyrata aly-miR402-3p mature miRNA |
| Sequence | 181 - ACAGAGUUCCGUAGACCACGG - 201 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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