miRBase entry: ssc-mir-382

Stem-loop ssc-mir-382


Accession
MI0015911
Description
Sus scrofa ssc-mir-382 precursor miRNA
Gene family
MIPF0000018; mir-154

Literature search
3 open access papers mention ssc-mir-382
(3 sentences)

Sequence

2 reads, 4 reads per million, 2 experiments
acuugaagagAAGUUGUUCGUGGUGGAUUCGcuuuacuuaugacgaaucauucacggacaacacuuuuuucaguacc
..(((((((((.(((((((((((..(((((((.........).))))))..)))))))))))..)))))))))....

Structure
--ac         -A           UG      - uuu 
    uugaagagA  GUUGUUCGUGG  GAUUCG c   a
    |||||||||  |||||||||||  |||||| |   c
    gacuuuuuu  caacaggcacu  cuaagc g   u
ccau         ca           ua      a uau 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature ssc-miR-382

Accession MIMAT0017956
Description Sus scrofa ssc-miR-382 mature miRNA
Sequence 11 - AAGUUGUUCGUGGUGGAUUCG - 31
Evidence experimental
Illumina [1-2]

References

  1. PubMed ID: 20433717
    Deciphering the porcine intestinal microRNA transcriptome
    Sharbati S, Friedländer MR, Sharbati J, Hoeke L, Chen W, Keller A, Stähler PF, Rajewsky N, Einspanier R
    BMC Genomics (2010) 11:275

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100