miRBase entry: hsa-mir-548al

Stem-loop hsa-mir-548al


Accession
MI0016851
Symbol
HGNC: MIR548AL
Description
Homo sapiens hsa-mir-548al precursor miRNA
Gene family
MIPF0000317; mir-548

Literature search
56 open access papers mention hsa-mir-548al
(170 sentences)

Sequence

291 reads, 45 reads per million, 49 experiments
ggucggugcaaaaguaauugcuguuuuugccauuaaaaauaauggcauuaaaaguaauggcaaaAACGGCAAUGACUUUUGUACCAaucuaauaucu
(((.(((((((((((.(((((((((((((((((((....((((...))))....))))))))))))))))))).))))))))))).)))........

Structure
--------   c           a                   aaaa    g 
        ggu ggugcaaaagu auugcuguuuuugccauua    uaau  
        ||| ||||||||||| |||||||||||||||||||    |||| g
        cua CCAUGUUUUCA UAACGGCAAaaacgguaau    auua  
ucuauaau   A           G                   gaaa    c 


Annotation confidence Not enough data
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Genome context
chr11: 74399237-74399333 [+]

Database links

Mature hsa-miR-548al

Accession MIMAT0019024
Description Homo sapiens hsa-miR-548al mature miRNA
Sequence 65 - AACGGCAAUGACUUUUGUACCA - 86
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20733160
    Deep sequencing of the small RNA transcriptome of normal and malignant human B cells identifies hundreds of novel microRNAs
    "Jima DD, Zhang J, Jacobs C, Richards KL, Dunphy CH, Choi WW, Au WY, Srivastava G, Czader MB, Rizzieri DA, Lagoo AS, Lugar PL, Mann KP, Flowers CR, Bernal-Mizrachi L, Naresh KN, Evens AM, Gordon LI, Luftig M, Friedman DR, Weinberg JB, Thompson MA, Gill JI,"
    "Blood (2010) 116:e118-e127