miRBase entry: gma-MIR5669

Stem-loop gma-MIR5669


Accession
MI0019263
Description
Glycine max gma-MIR5669 precursor miRNA


Sequence

uggugucaauCAAUGUAGUGUGGUAAGUGGUCagaguucaagucuauuggacaccuagauuggugauacug
.(((((((.(((((.(((.(((...(((((.(.........).)))))...)))))).)))))))))))).

Structure
u       a     G   U   GUA     U aga 
 gguguca uCAAU UAG GUG   AGUGG C   g
 ||||||| ||||| ||| |||   ||||| |   u
 ucauagu gguua auc cac   uuauc g   u
g       -     g   -   agg     u aac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 41839111-41839181 [+]

Database links

Mature gma-miR5669

Accession MIMAT0022451
Description Glycine max gma-miR5669 mature miRNA
Sequence 11 - CAAUGUAGUGUGGUAAGUGGUC - 32
Evidence experimental
Illumina [1], RT-PCR [1]

References

  1. PubMed ID: 21219599
    Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing
    Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS
    BMC Plant Biol (2011) 11:5