miRBase entry: gma-MIR164k

Stem-loop gma-MIR164k


Accession
MI0021689
Description
Glycine max gma-MIR164k precursor miRNA
Gene family
MIPF0000045; MIR164

Literature search
17 open access papers mention gma-MIR164k
(37 sentences)

Sequence

agguccuguUGGAGAAGCAGGGCACGUGCAacucaguucuaguucuagcucuauuauagcugcucuaguuuaucugauuuugcacgugcuccccuucuccaacacgauu
.((((.(((((((((((..((((((((((((.((((..((((..(.((((.......)))))..)))).....))))..))))))))))))..))))))))))).))))

Structure
a    c           CA            -c    ---uu    uu u    cu 
 gguc uguUGGAGAAG  GGGCACGUGCAa  ucag     cuag  c agcu  a
 |||| |||||||||||  ||||||||||||  ||||     ||||  | ||||  u
 uuag acaaccucuuc  cucgugcacguu  aguc     gauc  g ucga  u
-    c           cc            uu    uauuu    uc -    ua 


Annotation confidence Not enough data
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Genome context
chr20: 46912450-46912558 [-]

Database links

Mature gma-miR164k

Accession MIMAT0024895
Description Glycine max gma-miR164k mature miRNA
Sequence 10 - UGGAGAAGCAGGGCACGUGCA - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169