miRBase entry: mmu-mir-6345

Stem-loop mmu-mir-6345


Accession
MI0021873
Symbol
MGI: Mir6345
Description
Mus musculus mmu-mir-6345 precursor miRNA


Sequence

gcuuugugaguuuuccuuguuucaguguuagucUAGCACUGCUCAGGGUGAACUaguacagugugugguaguacuagguucuccauggacacaggcauaaaugaaacuugguuucugcucuuaaagcc
((((((.((((...((..(((((((((((...((((.((((((((.(.((........)).).)).)))))).))))((((.....))))...)))))...))))))..)).....)))).)))))).

Structure
-      u    --uuu  uu      ---     -------------agu    C      -  G G  AAC 
 gcuuug gagu     cc  guuuca   guguu                cUAG ACUGCU CA G UG   U
 |||||| ||||     ||  ||||||   |||||                |||| |||||| || | ||    
 cgaaau cucg     gg  caaagu   uacgg                gauc ugaugg gu u ac   a
c      u    ucuuu  uu      aaa     acacagguaccucuug    a      u  g g  aug 


Annotation confidence Not enough data
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Genome context
chr1: 93352158-93352285 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-6345
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-6345

Accession MIMAT0025088
Description Mus musculus mmu-miR-6345 mature miRNA
Sequence 34 - UAGCACUGCUCAGGGUGAACU - 54
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 22319597
    Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function
    Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T
    PLoS One (2012) 7:e30933