Stem-loop tae-MIR5049

Accession

MI0030419

Description

Triticum aestivum tae-MIR5049 precursor miRNA

Gene family

MIPF0001200; MIR5067

Literature search

7 open access papers mention tae-MIR5049
(11 sentences)

Sequence

33916 reads, 210 reads per million, 116 experiments

acggaaggauguacuuccuccaauccguauuacuuaucuuagauuugucuagauacauacauuuauacaaauuuaagacgaauAAUAUGGAUCGGAGGGAGUACcugauaauaa
..........(((((((((((.((((((((((.((.((((((((((((.(((((......))))).)))))))))))).)).)))))))))).)))))))))))..........

Structure

acggaaggau           a          c  a            c     ac 
          guacuuccucc auccguauua uu ucuuagauuugu uagau  a
          ||||||||||| |||||||||| || |||||||||||| |||||   
          CAUGAGGGAGG UAGGUAUAAu ag agaauuuaaaca auuua  u
aauaauaguc           C          a  c            u     ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature tae-miR5049-3p

• Accession: MIMAT0035809
• Description: Triticum aestivum tae-miR5049-3p mature miRNA
• Sequence: 84 - AAUAUGGAUCGGAGGGAGUAC - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24734873
   Identification and characterization of microRNAs in the flag leaf and developing seed of wheat (Triticum aestivum L.)
   Han R, Jian C, Lv J, Yan Y, Chi Q, Li Z, Wang Q, Zhang J, Liu X, Zhao H
   BMC Genomics (2014) 15:289