Stem-loop sequence egr-mir-1992

AccessionMI0033115 (change log)
DescriptionEchinococcus granulosus miR-1992 stem-loop
Literature search

1 open access papers mention egr-mir-1992
(2 sentences)

Stem-loop 
   --auc       u    -        a      cuugc   a 
5'      cguuuca uggu caauugcu auauuu     gua a
        ||||||| |||| |||||||| ||||||     |||  
3'      guaaagu acca guugacga uauaaa     cau u
   acuaa       u    u        c      -----   u
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (ASM52419v1; GCA_000524195.1) Overlapping transcripts
APAU02000092.1: 131559-131636 [+]
intergenic
Database links

Mature sequence egr-miR-1992-5p

Accession MIMAT0041197
Sequence

6 -  

uuucauuggucaauugcuaau

 - 26

Get sequence
Evidence experimental; Illumina [1-2]

Mature sequence egr-miR-1992-3p

Accession MIMAT0041198
Sequence

51 -  

ucagcaguuguaccauugaaaug

 - 73

Get sequence
Evidence experimental; Illumina [1-2]

References

1
PMID:25168356 "Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus" Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S BMC Genomics. 15:736(2014).
2
PMID:25656283 "microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach" Macchiaroli N, Cucher M, Zarowiecki M, Maldonado L, Kamenetzky L, Rosenzvit MC Parasit Vectors. 8:83(2015).