Stem-loop sequence aga-mir-33

Accession

MI0033352 (change log)

Description

Anopheles gambiae miR-33 stem-loop

Literature search

4 open access papers mention aga-mir-33
(11 sentences)

Stem-loop

   ---g          uu c         accg  u 
5'     ugcauuguag  g auugcacuu    ug u
       ||||||||||  | |||||||||    ||  
3'     acguaacguc  c ugacgugga    ac g
   ccca          uu a         --ca  g 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AgamP3; GCA_000005575.1): chrX: 1256014-1256078 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0033352

Mature sequence aga-miR-33-5p

• Accession: MIMAT0041523
• Sequence: 1 - gugcauuguaguugcauugca - 21
• Evidence: experimental; Illumina [1]

Mature sequence aga-miR-33-3p

• Accession: MIMAT0041524
• Sequence: 44 - caguacuucugcaaugcaaccc - 65
• Evidence: experimental; Illumina [1]

References

1. PMID:25766668 "The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs" Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T BMC Genomics. 16:100(2015).