Stem-loop sequence aga-mir-980

Accession

MI0033361 (change log)

Description

Anopheles gambiae miR-980 stem-loop

Literature search

1 open access papers mention aga-mir-980
(1 sentences)

Stem-loop

   cg   g         u  u      aaau 
5'   guc uucauuagg ca cuagcu    u
     ||| ||||||||| || ||||||    u
3'   cgg aagugaucc gu gaucga    u
   --   g         -  c      auca 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr2R: 21985899-21985956 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0033361

Mature sequence aga-miR-980-5p

• Accession: MIMAT0041537
• Sequence: 1 - cggucguucauuaggucaucuagc - 24
• Evidence: experimental; Illumina [1]

Mature sequence aga-miR-980-3p

• Accession: MIMAT0041538
• Sequence: 40 - uagcugccuagugaagggc - 58
• Evidence: experimental; Illumina [1]

References

1. PMID:25766668 "The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs" Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T BMC Genomics. 16:100(2015).