Stem-loop aga-mir-980

Accession

MI0033361

Description

Anopheles gambiae aga-mir-980 precursor miRNA

Literature search

1 open access papers mention aga-mir-980
(1 sentences)

Sequence

CGGUCGUUCAUUAGGUCAUCUAGCuaaauuuuacuaagcUAGCUGCCUAGUGAAGGGC
..(((.(((((((((.((.((((((...........)))))).))))))))))).)))

Structure

CG   G         U  U      aaau 
  GUC UUCAUUAGG CA CUAGCu    u
  ||| ||||||||| || ||||||    u
  CGG AAGUGAUCC GU GAUcga    u
--   G         -  C      auca 

Annotation confidence Not enough data

Genome context

chr2R: 21985899-21985956 [-]

Mature aga-miR-980-5p

• Accession: MIMAT0041537
• Description: Anopheles gambiae aga-miR-980-5p mature miRNA
• Sequence: 1 - CGGUCGUUCAUUAGGUCAUCUAGC - 24
• Evidence: experimental ; Illumina [1]

Mature aga-miR-980-3p

• Accession: MIMAT0041538
• Description: Anopheles gambiae aga-miR-980-3p mature miRNA
• Sequence: 40 - UAGCUGCCUAGUGAAGGGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100