miRBase entry: aga-mir-10366a-1

Stem-loop aga-mir-10366a-1

Accession

MI0033362

Description

Anopheles gambiae aga-mir-10366a-1 precursor miRNA

Sequence

CAUUGAAAUCGGCUGGGGUAGCgugucguuuuauuggcAAUCACCGGCUUUUUCAAUCAA
.(((((((..(((((((((....(((((......)))))))).)))))).)))))))...

Structure

--C       UC      -   AGCg     uu 
   AUUGAAA  GGCUGG GGU    ugucg  u
   |||||||  |||||| |||    |||||   
   UAACUUU  UCGGCC CUA    Acggu  u
AAC       -U      A   ----     ua

Annotation confidence Not enough data

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Genome context

chrX: 15153636-15153695 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from aga-mir-10366a-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aga-miR-10366a-5p

Accession	MIMAT0041539
Description	Anopheles gambiae aga-miR-10366a-5p mature miRNA
Sequence	1 - CAUUGAAAUCGGCUGGGGUAGC - 22
Evidence	experimental Illumina [1]

Mature aga-miR-10366a-3p

Accession	MIMAT0041540
Description	Anopheles gambiae aga-miR-10366a-3p mature miRNA
Sequence	39 - AAUCACCGGCUUUUUCAAUCAA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 25766668
The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
BMC Genomics (2015) 16:100