miRBase entry: aga-mir-31

Stem-loop aga-mir-31


Accession
MI0033378
Description
Anopheles gambiae aga-mir-31 precursor miRNA

Literature search
3 open access papers mention aga-mir-31
(4 sentences)

Sequence

UGGCAAGAUGUUGGCAUAGCUAaaagauuuggauuUAGCUAUUCAACUUCUUGUUUAU
.(((((((.(((((.(((((((((.........)))))))))))))).)))))))...

Structure
--U       U     C         aga 
   GGCAAGA GUUGG AUAGCUAaa   u
   ||||||| ||||| |||||||||   u
   UUGUUCU CAACU UAUCGAUuu   u
UAU       U     -         agg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 14375923-14375980 [+]

Database links

Mature aga-miR-31-5p

Accession MIMAT0041568
Description Anopheles gambiae aga-miR-31-5p mature miRNA
Sequence 1 - UGGCAAGAUGUUGGCAUAGCUA - 22
Evidence experimental
Illumina [1]

Mature aga-miR-31-3p

Accession MIMAT0041569
Description Anopheles gambiae aga-miR-31-3p mature miRNA
Sequence 36 - UAGCUAUUCAACUUCUUGUUUAU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25766668
    The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
    Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
    BMC Genomics (2015) 16:100