Stem-loop sequence aga-mir-31

Accession

MI0033378 (change log)

Description

Anopheles gambiae miR-31 stem-loop

Literature search

3 open access papers mention aga-mir-31
(4 sentences)

Stem-loop

   --u       u     c         aga 
5'    ggcaaga guugg auagcuaaa   u
      ||||||| ||||| |||||||||   u
3'    uuguucu caacu uaucgauuu   u
   uau       u     -         agg 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AgamP3; GCA_000005575.1): chrX: 14375923-14375980 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0033378

Mature sequence aga-miR-31-5p

• Accession: MIMAT0041568
• Sequence: 1 - uggcaagauguuggcauagcua - 22
• Evidence: experimental; Illumina [1]

Mature sequence aga-miR-31-3p

• Accession: MIMAT0041569
• Sequence: 36 - uagcuauucaacuucuuguuuau - 58
• Evidence: experimental; Illumina [1]

References

1. PMID:25766668 "The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs" Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T BMC Genomics. 16:100(2015).