miRBase entry: aga-mir-10375b-3

Stem-loop aga-mir-10375b-3

Accession

MI0033382

Description

Anopheles gambiae aga-mir-10375b-3 precursor miRNA

Sequence

ACAUUGUAGAAAGGGUCAAAAUGauauaauuucugcauuucaUUGGGCGCUAUCUACAAUGUAG
((((((((((.((.(((..(((((...............))))).))).)).))))))))))..

Structure

--          A  G   AA     uauaau 
  ACAUUGUAGA AG GUC  AAUGa      u
  |||||||||| || |||  |||||      u
  UGUAACAUCU UC CGG  UUacu      c
GA          A  G   -G     uuacgu

Annotation confidence Not enough data

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Genome context

chrX: 1724403-1724466 [+]

Clustered miRNAs

8 other miRNAs are < 10 kb from aga-mir-10375b-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aga-miR-10375b-5p

Accession	MIMAT0041572
Description	Anopheles gambiae aga-miR-10375b-5p mature miRNA
Sequence	1 - ACAUUGUAGAAAGGGUCAAAAUG - 23
Evidence	experimental Illumina [1]

Mature aga-miR-10375b-3p

Accession	MIMAT0041573
Description	Anopheles gambiae aga-miR-10375b-3p mature miRNA
Sequence	43 - UUGGGCGCUAUCUACAAUGUAG - 64
Evidence	experimental Illumina [1]

References

PubMed ID: 25766668
The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
BMC Genomics (2015) 16:100