miRBase entry: sfr-mir-277-1

Stem-loop sfr-mir-277-1


Accession
MI0033568
Description
Spodoptera frugiperda sfr-mir-277-1 precursor miRNA


Sequence

acgcuccggaguuCGUGCCAGGAGUGCGUUUGCAaagcacgcuacaaguuugcguuaaggcaaaguugacacugUAAAUGCACUAUCUGGUACGACAccccggagugu
(((((((((.((((((((((((((((((((((((..........(((.(((((......))))).)))....)))))))))))).)))))))))).)).)))))))))

Structure
         a  -          -            aagcacgcua   g     gu 
acgcuccgg gu uCGUGCCAGG AGUGCGUUUGCA          caa uuugc  u
||||||||| || |||||||||| ||||||||||||          ||| |||||   
ugugaggcc cA AGCAUGGUCU UCACGUAAAUgu          guu aaacg  a
         c  C          A            ------caca   g     ga 


Annotation confidence Not enough data
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Genome context
JQCY02003144.1: 30110-30217 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-277-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-277-5p

Accession MIMAT0041818
Description Spodoptera frugiperda sfr-miR-277-5p mature miRNA
Sequence 14 - CGUGCCAGGAGUGCGUUUGCA - 34
Evidence experimental
Illumina [1]

Mature sfr-miR-277-3p

Accession MIMAT0041819
Description Spodoptera frugiperda sfr-miR-277-3p mature miRNA
Sequence 75 - UAAAUGCACUAUCUGGUACGACA - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988