Stem-loop mes-MIR482b

Accession

MI0037912

Description

Manihot esculenta mes-MIR482b precursor miRNA

Literature search

1 open access papers mention mes-MIR482b
(1 sentences)

Sequence

agauagagagcuacuggaaguuguaggaaugggcgguuugggaaaaaaucauauacauaaauacgauaacagauuacgucgaaaaucaaauuaaguguauacaaguuuucUUCCCAAUGUCGCCCAUUCCGAugauuuccagaagcuccucccuuuc
((..((.(((((.(((((((((((.(((((((((((.((((((((((((..(((((((.(((..(((....(((...)))....)))..)))..)))))))...))))).)))))))..))))))))))).))))))))))).)))))))..))...

Structure

---  au  a     a           a           -u       -     -ca       -a   ac   aaca   u 
   ag  ag gagcu cuggaaguugu ggaaugggcgg  uugggaa aaaau   uauacau  aau  gau    gau  
   ||  || ||||| ||||||||||| |||||||||||  ||||||| |||||   |||||||  |||  |||    ||| a
   uc  uc cucga gaccuuuaguA CCUUACCCGCU  AACCCUU uuuug   auaugug  uua  cua    cug  
cuu  cc  -     a           G           GU       c     aac       aa   aa   aaag   c 

Annotation confidence Not enough data

Genome context

scaffold04043: 391302-391458 [-]

Mature mes-miR482b

• Accession: MIMAT0045976
• Description: Manihot esculenta mes-miR482b mature miRNA
• Sequence: 111 - UUCCCAAUGUCGCCCAUUCCGA - 132
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26822616
   High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs
   Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN
   BMC Genomics (2016) 17:85