Accession
MI0000180
Description
Arabidopsis thaliana
ath-MIR156c precursor miRNA
Literature search
79 open access papers mention ath-MIR156c
(786 sentences)
(786 sentences)
Sequence
cgcauagaaacUGACAGAAGAGAGUGAGCACacaaaggcacuuugcauguucgaugcauuugcuucucuugcguGCUCACUGCUCUAUCUGUCAGAuuccggcu
.((...(((.(((((((((((((((((((((.((((((((...(((((.....)))))..)))))...))).))))))))).)))).)))))))).)))..)).
.((...(((.(((((((((((((((((((((.((((((((...(((((.....)))))..)))))...))).))))))))).)))).)))))))).)))..)).
Structure
c aua a - - a --- cuu g gc gaa cUGACAGA AGAG AGUGAGCAC caa aggca ugcau u || ||| |||||||| |||| ||||||||| ||| ||||| ||||| u cg cuu GACUGUCU UCUC UCACUCGug guu uucgu acgua c u -gc A A G c cuc -uu g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
MIR156c is thought to target 10 mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box [1]. The complementary sites are downstream of this conserved domain, within a poorly conserved protein-coding context or the 3' UTR [2].
Genome context
chr4: 15415418-15415521 [-]
Database links
Mature ath-miR156c-5p
| Accession | MIMAT0000168 |
| Description | Arabidopsis thaliana ath-miR156c-5p mature miRNA |
| Sequence | 12 - UGACAGAAGAGAGUGAGCAC - 31 |
| Evidence |
experimental
cloned [1,3], Northern [1], 5'RACE [3], 454 [4-5], MPSS [4], Illumina [6] |
Mature ath-miR156c-3p
| Accession | MIMAT0031867 |
| Description | Arabidopsis thaliana ath-miR156c-3p mature miRNA |
| Sequence | 75 - GCUCACUGCUCUAUCUGUCAGA - 96 |
| Evidence | not_experimental |
References
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