Accession
MI0000183
Description
Arabidopsis thaliana
ath-MIR156f precursor miRNA
Literature search
78 open access papers mention ath-MIR156f
(775 sentences)
(775 sentences)
Sequence
gaguggugaggaauugauggUGACAGAAGAGAGUGAGCACacaugguggcuuucuugcauauuugaagguuccaugcuugaagcuauguguGCUCACUCUCUAUCCGUCACCcccuucucucccucucccuc
(((.((.((((....((.((((((.((((((((((((((((((((((....(((..((((.............))))..))))))))))))))))))))))).)).))))))....))....)))).)))))
(((.((.((((....((.((((((.((((((((((((((((((((((....(((..((((.............))))..))))))))))))))))))))))).)).))))))....))....)))).)))))
Structure
u u aauu ---u A - ggcu uu auuug gag gg gagg ga ggUGAC GA AGAGAGUGAGCACacauggu uuc gcau a ||| || |||| || |||||| || |||||||||||||||||||| ||| |||| a cuc cc cucc cu CCACUG CU UCUCUCACUCGuguguaucg aag cgua g - u cucu uccc C A ---- uu ccuug
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
MIR156f is thought to target 10 mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box [1]. The complementary sites are downstream of this conserved domain, within a poorly conserved protein-coding context or the 3' UTR [2].
Genome context
chr5: 9136106-9136237 [+]
Database links
Mature ath-miR156f-5p
| Accession | MIMAT0000171 |
| Description | Arabidopsis thaliana ath-miR156f-5p mature miRNA |
| Sequence | 21 - UGACAGAAGAGAGUGAGCAC - 40 |
| Evidence |
experimental
cloned [1,3], Northern [1], 5'RACE [3], 454 [4-5], MPSS [4], Illumina [6] |
Mature ath-miR156f-3p
| Accession | MIMAT0031869 |
| Description | Arabidopsis thaliana ath-miR156f-3p mature miRNA |
| Sequence | 92 - GCUCACUCUCUAUCCGUCACC - 112 |
| Evidence | not_experimental |
References
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