Accession
MI0000199
Description
Arabidopsis thaliana
ath-MIR165a precursor miRNA
Literature search
44 open access papers mention ath-MIR165a
(254 sentences)
(254 sentences)
Sequence
guugaggGGAAUGUUGUCUGGAUCGAGGauauuauagauauauacauguguauguuaaugauucaagugaucauagagaguauccUCGGACCAGGCUUCAUCCCCCccaac
((((.((((.(((..((((((.(((((((((((...((((((((....)))))))).((((((.....))))))....))))))))))).))))))..))).)))).))))
((((.((((.(((..((((((.(((((((((((...((((((((....)))))))).((((((.....))))))....))))))))))).))))))..))).)))).))))
Structure
a A UU A -------------------aua c
guug ggGG AUG GUCUGG UCGAGGauauu gauauaua a
|||| |||| ||| |||||| ||||||||||| ||||||||
caac CCCC UAC CGGACC GGCUccuauga uuguaugu u
c C UU A gagauacuagugaacuuaguaa g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
MIR165a is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2].
Genome context
chr1: 78927-79037 [-]
Database links
Mature ath-miR165a-3p
| Accession | MIMAT0000187 |
| Description | Arabidopsis thaliana ath-miR165a-3p mature miRNA |
| Sequence | 86 - UCGGACCAGGCUUCAUCCCCC - 106 |
| Evidence |
experimental
cloned [1,3], Northern [1], 5'RACE [3], 454 [4-5], MPSS [4], Illumina [6] |
Mature ath-miR165a-5p
| Accession | MIMAT0031879 |
| Description | Arabidopsis thaliana ath-miR165a-5p mature miRNA |
| Sequence | 8 - GGAAUGUUGUCUGGAUCGAGG - 28 |
| Evidence | not_experimental |
References
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