Accession
MI0000202
Description
Arabidopsis thaliana
ath-MIR166b precursor miRNA
Gene family
MIPF0000004;
MIR166
Literature search
39 open access papers mention ath-MIR166b
(312 sentences)
(312 sentences)
Sequence
uugaggGGACUGUUGUCUGGCUCGAGGacucuuauucuaauacaaucucauuugaauacauucagaucugaugauugauuaggguuuuagugucgUCGGACCAGGCUUCAUUCCCCccaa
.((.(((((.((..((((((.((((.(((.((.((((((((.((((((((((((((....))))))..))).)))))))))))))...)).))).)))).))))))..)).))))).)).
.((.(((((.((..((((((.((((.(((.((.((((((((.((((((((((((((....))))))..))).)))))))))))))...)).))).)))).))))))..)).))))).)).
Structure
u a C UU C G u --u a - -- u ug ggGGA UG GUCUGG UCGA Gac cu auucuaau caauc uca uuugaa a || ||||| || |||||| |||| ||| || |||||||| ||||| ||| |||||| ac CCCCU AC CGGACC GGCU cug ga ugggauua guuag agu agacuu c a c U UU A g u uuu - u cu a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
MIR166b, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2].
Genome context
chr3: 22922206-22922325 [+]
Database links
Mature ath-miR166b-3p
| Accession | MIMAT0000190 |
| Description | Arabidopsis thaliana ath-miR166b-3p mature miRNA |
| Sequence | 96 - UCGGACCAGGCUUCAUUCCCC - 116 |
| Evidence |
experimental
cloned [1,3], Northern [1], 5'RACE [3], 454 [4-5], MPSS [4], Illumina [6] |
Mature ath-miR166b-5p
| Accession | MIMAT0031881 |
| Description | Arabidopsis thaliana ath-miR166b-5p mature miRNA |
| Sequence | 7 - GGACUGUUGUCUGGCUCGAGG - 27 |
| Evidence |
experimental
Illumina [7] |
References
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