Accession
MI0000217
Description
Arabidopsis thaliana
ath-MIR173 precursor miRNA MIR173
Gene
family?
family?
RF03457;
MIR173
Literature search
15 open access papers mention ath-MIR173
(47 sentences)
(47 sentences)
Sequence
uaaguacuUUCGCUUGCAGAGAGAAAUCACaguggucaaaaaaguuguaguuuucuuaaagucucuuuccucugUGAUUCUCUGUGUAAGCGAAAgagcuug
(((((.((((((((((((.((((((.((((((.((.......(.((..((....))..)).)......)).)))))))))))).)))))))))))).)))))
(((((.((((((((((((.((((((.((((((.((.......(.((..((....))..)).)......)).)))))))))))).)))))))))))).)))))
Structure
a G A u ucaaaaa g gu u
uaagu cuUUCGCUUGCA AGAGAA UCACag gg a uu ag u
||||| |||||||||||| |||||| |||||| || | || ||
guucg gAAAGCGAAUGU UCUCUU AGUguc cc u aa uc u
a G - u -uuucuc g au u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
MIR173 is thought to target mRNAs coding for a protein of unknown function (At3g28460) [1].
Genome context
chr3: 8236153-8236254 [+]
Database links
Mature ath-miR173-5p
| Accession | MIMAT0000206 |
| Description | Arabidopsis thaliana ath-miR173-5p mature miRNA |
| Sequence | 9 - UUCGCUUGCAGAGAGAAAUCAC - 30 |
| Evidence |
experimental
cloned [1-2], 454 [3-4], MPSS [3], Illumina [5] |
Mature ath-miR173-3p
| Accession | MIMAT0022843 |
| Description | Arabidopsis thaliana ath-miR173-3p mature miRNA |
| Sequence | 75 - UGAUUCUCUGUGUAAGCGAAA - 95 |
| Evidence |
experimental
Illumina [6] |
References
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