Accession
MI0000567
Symbol
MGI:
Mir18
Description
Mus musculus
mmu-mir-18a precursor miRNA mir-17
Gene
family?
family?
RF00051;
mir-17
Literature search
122 open access papers mention mmu-mir-18a
(542 sentences)
(542 sentences)
Sequence
91120
reads,
780
reads per million, 105 experiments
ugcgugcuuuuuguucUAAGGUGCAUCUAGUGCAGAUAGugaaguagacuagcaucuACUGCCCUAAGUGCUCCUUCUGgcauaagaaguuauguc
.(((((((((((((.((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..))).)))))))).))))).
.(((((((((((((.((((((.((((.(((.((((.(((((...........)).))))))).))).)))).)))..))).)))))))).))))).
Structure
u - u -- U C U A - aagu gcgug cuuuuugu cUA AGG GCAU UAG GCAG UAG ug a ||||| |||||||| ||| ||| |||| ||| |||| ||| || g uguau gaagaaua gGU UCC CGUG AUC CGUC Auc ac a c u c CU U A C - u gauc
Annotation confidence
High
Do you think this miRNA is real?
Comments
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. The ends of the miRNA may be offset with respect to previous annotations.
Genome context
chr14: 115043851-115043946 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from mmu-mir-18a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mmu-miR-18a-5p
| Accession | MIMAT0000528 |
| Description | Mus musculus mmu-miR-18a-5p mature miRNA |
| Sequence | 17 - UAAGGUGCAUCUAGUGCAGAUAG - 39 |
| Evidence |
experimental
cloned [1-3], Illumina [4-5] |
| Database links |
|
| Predicted targets |
|
Mature mmu-miR-18a-3p
| Accession | MIMAT0004626 |
| Description | Mus musculus mmu-miR-18a-3p mature miRNA |
| Sequence | 58 - ACUGCCCUAAGUGCUCCUUCUG - 79 |
| Evidence |
experimental
cloned [3], Illumina [4-5] |
| Database links |
|
| Predicted targets |
|
References
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