Accession
MI0001007
Description
Arabidopsis thaliana
ath-MIR395a precursor miRNA
Literature search
26 open access papers mention ath-MIR395a
(157 sentences)
(157 sentences)
Sequence
augucuccuagaguuccucugagcacuucauuggggauacaauuuuucuaaaugauuauccaCUGAAGUGUUUGGGGGAACUCccggacccau
(((..(((..((((((((((((((((((((.((((......((((....)))).....)))).))))))))))))))))))))..)))..)))
(((..(((..((((((((((((((((((((.((((......((((....)))).....)))).))))))))))))))))))))..)))..)))
Structure
uc ua u gauaca u aug ucc gaguuccucugagcacuuca uggg auuu u ||| ||| |||||||||||||||||||| |||| |||| uac agg CUCAAGGGGGUUUGUGAAGU accu uaaa c cc cc C -auuag u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1].
Genome context
chr1: 9363196-9363288 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ath-MIR395a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ath-miR395a
| Accession | MIMAT0000938 |
| Description | Arabidopsis thaliana ath-miR395a mature miRNA |
| Sequence | 63 - CUGAAGUGUUUGGGGGAACUC - 83 |
| Evidence |
experimental
5'RACE [1], Northern [1], PCR [1], MPSS [2], 454 [3], Illumina [4] |
References
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