Stem-loop gga-let-7i

Accession

MI0001168

Description

Gallus gallus gga-let-7i precursor miRNA

Literature search

71 open access papers mention gga-let-7i
(275 sentences)

Sequence

9993021 reads, 5110.0 reads per million, 260 experiments

cuggcUGAGGUAGUAGUUUGUGCUGUUggucggguugugacauugcccgcuguggagauaaCUGCGCAAGCUACUGCCUUGCUa
.((((.(((((((((((((((((.(((((.(((((.........)))))))........))).)))))))))))))))))))))

Structure

c    U                 U   --------  u     ugu 
 uggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
 |||| ||||||||||||||||| |||        || |||||   a
 aUCG UUCCGUCAUCGAACGCG Caa        uc gcccg   c
-    -                 U   uagaggug  -     uua 

Annotation confidence High

Genome context

1: 33188029-33188112 [+]

Mature gga-let-7i-5p

• Accession: MIMAT0001098
• Description: Gallus gallus gga-let-7i-5p mature miRNA
• Sequence: 6 - UGAGGUAGUAGUUUGUGCUGUU - 27
• Evidence: experimental ; cloned [2]

Mature gga-let-7i-3p

• Accession: MIMAT0061064
• Description: Gallus gallus gga-let-7i-3p mature miRNA
• Sequence: 62 - CUGCGCAAGCUACUGCCUUGCU - 83
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. PubMed ID: 18256158
   MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs
   "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V"
   "J Virol (2008) 82:4007-4015


3. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: