Stem-loop gga-mir-107

Accession

MI0001215

Description

Gallus gallus gga-mir-107 precursor miRNA mir-103

Gene
family

RF00129; mir-103

Literature search

10 open access papers mention gga-mir-107
(52 sentences)

Sequence

8333 reads, 108 reads per million, 5 experiments

cucuuugcuuucAGCUUCUUUACAGUGUUGCCUUGuggcauggaguucaAGCAGCAUUGUACAGGGCUAUCAaagcaugga
.(((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))

Structure

c   u      --c    U  U           C   u   a 
 ucu ugcuuu   AGCU CU UACAGUGUUGC UUG ggc u
 ||| ||||||   |||| || ||||||||||| ||| ||| g
 agg acgaaA   UCGG GA AUGUUACGACG Aac uug g
-   u      CUA    -  C           -   -   a 

Annotation confidence Not enough data

Genome context

chr6: 19401516-19401596 [-]

Mature gga-miR-107-3p

• Accession: MIMAT0001147
• Description: Gallus gallus gga-miR-107-3p mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUCA - 72
• Evidence: experimental ; Illumina [2]

Mature gga-miR-107-5p

• Accession: MIMAT0026520
• Description: Gallus gallus gga-miR-107-5p mature miRNA
• Sequence: 13 - AGCUUCUUUACAGUGUUGCCUUG - 35
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45