Stem-loop gga-mir-107

Accession

MI0001215

Description

Gallus gallus gga-mir-107 precursor miRNA mir-103

Gene
family

RF00129; mir-103

Literature search

33 open access papers mention gga-mir-107
(97 sentences)

Sequence

2219154 reads, 1430.0 reads per million, 260 experiments

cucuuugcuuucAGCUUCUUUACAGUGUUGCCUUGUggcauggaguucaAGCAGCAUUGUACAGGGCUAUCaaagcaugga
.(((.((((((.((((.((.(((((((((((.(((.(((.....))))))))))))))))).))))))...)))))).)))

Structure

c   u      --c    U  U           C   U   a 
 ucu ugcuuu   AGCU CU UACAGUGUUGC UUG ggc u
 ||| ||||||   |||| || ||||||||||| ||| ||| g
 agg acgaaa   UCGG GA AUGUUACGACG Aac uug g
-   u      CUA    -  C           -   -   a 

Annotation confidence High

Genome context

6: 20164516-20164596 [-]

Mature gga-miR-107-5p

• Accession: MIMAT0026520
• Description: Gallus gallus gga-miR-107-5p mature miRNA
• Sequence: 13 - AGCUUCUUUACAGUGUUGCCUUGU - 36
• Evidence: experimental ; Illumina [2]

Mature gga-miR-107-3p

• Accession: MIMAT0001147
• Description: Gallus gallus gga-miR-107-3p mature miRNA
• Sequence: 50 - AGCAGCAUUGUACAGGGCUAUC - 71
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45