Stem-loop gga-mir-103-1

Accession

MI0001236

Description

Gallus gallus gga-mir-103-1 precursor miRNA mir-103

Gene
family

RF00129; mir-103

Literature search

8 open access papers mention gga-mir-103-1
(86 sentences)

Sequence

455598 reads, 6006 reads per million, 5 experiments

ugcugccuUCGGCUUCUUUACAGUGCUGCCUUGuugcauauggaucaAGCAGCAUUGUACAGGGCUAUGAaggcacug
...(((((((((((.((.(((((((((((.(((.(.(....).).)))))))))))))).))))))..)))))))...

Structure

ugc       --    U  U           C   u g a 
   ugccuUC  GGCU CU UACAGUGCUGC UUG u c u
   |||||||  |||| || ||||||||||| ||| | |  
   acggaAG  UCGG GA AUGUUACGACG Aac a g a
guc       UA    -  C           -   u g u 

Annotation confidence Not enough data

Genome context

chr13: 4689830-4689907 [+]

Mature gga-miR-103-3p

• Accession: MIMAT0001145
• Description: Gallus gallus gga-miR-103-3p mature miRNA
• Sequence: 48 - AGCAGCAUUGUACAGGGCUAUGA - 70
• Evidence: experimental ; Illumina [2]

Mature gga-miR-103-1-5p

• Accession: MIMAT0031070
• Description: Gallus gallus gga-miR-103-1-5p mature miRNA
• Sequence: 9 - UCGGCUUCUUUACAGUGCUGCCUUG - 33
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45