Stem-loop gga-mir-181a-2

Accession

MI0001243

Description

Gallus gallus gga-mir-181a-2 precursor miRNA

Literature search

14 open access papers mention gga-mir-181a-2
(105 sentences)

Sequence

45560935 reads, 24648.0 reads per million, 260 experiments

gccaucuuuggauagcuucagugAACAUUCAACGCUGUCGGUGAGUUugagaacuaagaaaaACCAUCGACCGUUGACUGUACCUugaggu
.(((....)))...(((((((.(.(((.((((((..(((((((.((((............))))))))))))))))).))).).)))))))

Structure

gccaucuuuggaua       u A   U      CU       A    gagaa 
              gcuucag g ACA UCAACG  GUCGGUG GUUu     c
              ||||||| | ||| ||||||  ||||||| ||||      
              uggaguU C UGU AGUUGC  CAGCUAC CAaa     u
--------------       C A   C      --       -    aagaa 

Annotation confidence High

Genome context

17: 10104804-10104894 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-181a-2

Mature gga-miR-181a-2-5p

• Accession: MIMAT0001168
• Description: Gallus gallus gga-miR-181a-2-5p mature miRNA
• Sequence: 24 - AACAUUCAACGCUGUCGGUGAGUU - 47
• Evidence: experimental ; cloned [2]

Mature gga-miR-181a-2-3p

• Accession: MIMAT0051213
• Description: Gallus gallus gga-miR-181a-2-3p mature miRNA
• Sequence: 63 - ACCAUCGACCGUUGACUGUACCU - 85
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716


2. PubMed ID: 18256158
   MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs
   "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V"
   "J Virol (2008) 82:4007-4015


3. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None: