Stem-loop gga-mir-7-3

Accession

MI0001269

Description

Gallus gallus gga-mir-7-3 precursor miRNA

Literature search

10 open access papers mention gga-mir-7-3
(153 sentences)

Sequence

1373962 reads, 956.0 reads per million, 253 experiments

cuguggucuggcucugugUGGAAGACUAGUGAUUUUGUUGUUaugauuuauaaaggugaCAACAAAUCAUAGCCUGCCAUAcagcacagaucuuc
....((((((...((((((((.((.(((.((((((.((((((((...........))))))))))))))))).)).))))))))..))))))...

Structure

cugu      gcu        A  A   G      U        gauu 
    ggucug   cugugUGG AG CUA UGAUUU GUUGUUau    u
    ||||||   |||||||| || ||| |||||| ||||||||    a
    cuagac   gacAUACC UC GAU ACUAAA CAACagug    u
-cuu      -ac        G  C   -      -        gaaa 

Annotation confidence High

Genome context

28: 5324930-5325024 [-]

Mature gga-miR-7-5p

• Accession: MIMAT0001157
• Description: Gallus gallus gga-miR-7-5p mature miRNA
• Sequence: 19 - UGGAAGACUAGUGAUUUUGUUGUU - 42
• Evidence: experimental ; cloned [2]

Mature gga-miR-7-3-3p

• Accession: MIMAT0061070
• Description: Gallus gallus gga-miR-7-3-3p mature miRNA
• Sequence: 60 - CAACAAAUCAUAGCCUGCCAUA - 81
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 18256158
   MicroRNA profile of Marek's disease virus-transformed T-cell line MSB-1: predominance of virus-encoded microRNAs
   "Yao Y, Zhao Y, Xu H, Smith LP, Lawrie CH, Watson M, Nair V"
   "J Virol (2008) 82:4007-4015


2. 
   "McBride D, Carre W, Law A, Clinton M"
   (None) None:


3. PubMed ID: 18463306
   Conservation of small RNA pathways in platypus
   "Murchison EP, Kheradpour P, Sachidanandam R, Smith C, Hodges E, Xuan Z, Kellis M, Grutzner F, Stark A, Hannon GJ"
   "Genome Res (2008) 18:995-1004