Stem-loop dps-bantam

Accession

MI0001287

Description

Drosophila pseudoobscura dps-bantam precursor miRNA

Literature search

5 open access papers mention dps-bantam
(20 sentences)

Sequence

3668778 reads, 37795.0 reads per million, 22 experiments

auuugacuacgaaaCCGGUUUUCGAUUUGGUUUGACUguuuuuuauacaagUGAGAUCAUUUUGAAAGCUGAUUuugucaa
........((((((.((((((((((..((((((.(((((.......)).))).))))))..)))))))))).))))))...

Structure

auuugacu      C          UU      G   -  uu 
        acgaaa CGGUUUUCGA  UGGUUU ACU gu  u
        |||||| ||||||||||  |||||| ||| ||  u
        uguuUU GUCGAAAGUU  ACUAGA Uga ca  u
-----aac      A          UU      G   a  ua 

Annotation confidence High

Genome context

ref|NC_046683.1|: 64631104-64631184 [+]

Mature dps-bantam-5p

• Accession: MIMAT0053356
• Description: Drosophila pseudoobscura dps-bantam-5p mature miRNA
• Sequence: 15 - CCGGUUUUCGAUUUGGUUUGACU - 37
• Evidence: not_experimental

Mature dps-bantam-3p

• Accession: MIMAT0001197
• Description: Drosophila pseudoobscura dps-bantam-3p mature miRNA
• Sequence: 52 - UGAGAUCAUUUUGAAAGCUGAUU - 74
• Evidence: not_experimental

References